4. Working with Environments

The following discusses Pkg's interaction with environments. For more on the role environments play in code loading, including the "stack" of environments from which code can be loaded, see this section in the Julia manual.

Creating your own projects

So far we have added packages to the default project at ~/.julia/environments/v1.6. It is however easy to create other, independent, projects. This approach has the benefit of allowing you to check-in a Project.toml, and even a Manifest.toml if you wish, into version control (e.g. git) alongside your code. It should be pointed out that when two projects use the same package at the same version, the content of this package is not duplicated. In order to create a new project, create a directory for it and then activate that directory to make it the "active project", which package operations manipulate:

julia> mkdir("MyProject")

julia> cd("MyProject")

# we can now use "." instead of a longer relative or full path:
(v1.0) pkg> activate .

(MyProject) pkg> st
    Status `Project.toml`

Note that the REPL prompt changed when the new project is activated. Since this is a newly created project, the status command shows that it contains no packages, and in fact, it has no project or manifest file until we add a package to it:

julia> readdir()
0-element Array{String,1}

(MyProject) pkg> add Example
  Updating registry at `~/.julia/registries/General`
  Updating git-repo `https://github.com/JuliaRegistries/General.git`
 Resolving package versions...
  Updating `Project.toml`
  [7876af07] + Example v0.5.1
  Updating `Manifest.toml`
  [7876af07] + Example v0.5.1
  [8dfed614] + Test
Precompiling project...
  1 dependency successfully precompiled in 2 seconds

julia> readdir()
2-element Array{String,1}:

julia> print(read("Project.toml", String))
Example = "7876af07-990d-54b4-ab0e-23690620f79a"

julia> print(read("Manifest.toml", String))
deps = ["Test"]
git-tree-sha1 = "8eb7b4d4ca487caade9ba3e85932e28ce6d6e1f8"
uuid = "7876af07-990d-54b4-ab0e-23690620f79a"
version = "0.5.1"

uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40"

This new environment is completely separate from the one we used earlier.

Project Precompilation

Before a package can be imported, Julia will "precompile" the source code into an intermediate more efficient cache on disc. This precompilation can be triggered via code loading if the un-imported package is new or has changed since the last cache

julia> using Example
[ Info: Precompiling Example [7876af07-990d-54b4-ab0e-23690620f79a]

or using Pkg's precompile option, which can precompile the entire project, or a given dependency, and do so in parallel, which can be significantly faster than the code-load route above.

(@v1.6) pkg> precompile
Precompiling project...
  23 dependencies successfully precompiled in 36 seconds

However, neither of these should be required routinely due to Pkg's automatic precompilation.

Automatic Precompilation

By default, any package that is added to a project or updated in a Pkg action will be automatically precompiled, along with its dependencies.

(@v1.6) pkg> add Images
   Resolving package versions...
    Updating `~/.julia/environments/v1.9/Project.toml`
  [916415d5] + Images v0.25.2
    Updating `~/.julia/environments/v1.9/Manifest.toml`
Precompiling project...
  Progress [===================>                     ]  45/97
  ✓ NaNMath
  ✓ IntervalSets
  ◐ CoordinateTransformations
  ◑ ArnoldiMethod
  ◑ IntegralArrays
  ◒ RegionTrees
  ◐ ChangesOfVariables
  ◓ PaddedViews

The exception is the develop command, which neither builds nor precompiles the package. When that happens is left up to the user to decide.

If a given package version errors during auto-precompilation, Pkg will remember for the following times it automatically tries, and will skip that package with a brief warning. Manual precompilation can be used to force these packages to be retried, as pkg> precompile will always retry all packages.

To disable the auto-precompilation, set ENV["JULIA_PKG_PRECOMPILE_AUTO"]=0.

Precompiling new versions of loaded packages

If a package that has been updated is already loaded in the session, the precompilation process will go ahead and precompile the new version, and any packages that depend on it, but will note that the package cannot be used until session restart.

Using someone else's project

Simply clone their project using e.g. git clone, cd to the project directory and call

(v1.0) pkg> activate .

(SomeProject) pkg> instantiate

If the project contains a manifest, this will install the packages in the same state that is given by that manifest. Otherwise, it will resolve the latest versions of the dependencies compatible with the project.

Note that activate by itself does not install missing dependencies. If you only have a Project.toml, a Manifest.toml must be generated by "resolving" the environment, then any missing packages must be installed and precompiled. instantiate does all this for you.

If you already have a resolved Manifest.toml, then you will still need to ensure that the packages are installed and with the correct versions. Again instantiate does this for you.

In short, instantiate is your friend to make sure an environment is ready to use. If there's nothing to do, instantiate does nothing.

Specifying project on startup

Instead of using activate from within Julia you can specify the project on startup using the --project=<path> flag. For example, to run a script from the command line using the environment in the current directory you can run

$ julia --project=. myscript.jl